nf-core/odgi/stats @ 0.0.0-0c7146d
Summary
Metrics describing a variation graph and its path relationship.
Get started
Add the following snippet to your workflow script to include this module.
include { ODGI_STATS } from 'nf-core/odgi/stats'
License
MIT License
Process
Name
|
ODGI_STATS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
graph
file
|
Pangenome graph in binary ODGI or in GFA v1.0 format *.{og,gfa}
|
Output
3 channels
#1
tsv
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.og.stats.tsv
file
|
Optional output file that contains graph statistics in TSV format. *.{tsv}
|
#2
yaml
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.og.stats.yaml
file
|
Optional output file that contains graph statistics in YAML format. *.{yaml}
|
#3
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| odgi | An optimized dynamic genome/graph implementation | https://github.com/pangenome/odgi |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:59:31 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fodgi%2Fstats/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/odgi/stats/blobs/sha256:1dc88006fba95accf9cfb183e7aba16b9822306e4d55d371dd1801effa159939 |
| Size | 2.2 KB |
| Checksum | sha256:1dc88006fba95accf9cfb183e7aba16b9822306e4d55d371dd1801effa159939 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:59:31 (UTC) | 1 | 2.2 KB | - |