nf-core/metaphlan/mergemetaphlantables @ 0.0.0-0c7146d
Summary
Merges output abundance tables from MetaPhlAn4
Get started
Add the following snippet to your workflow script to include this module.
include { METAPHLAN_MERGEMETAPHLANTABLES } from 'nf-core/metaphlan/mergemetaphlantables'
License
MIT License
Process
Name
|
METAPHLAN_MERGEMETAPHLANTABLES |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
profiles
file
|
List of per-sample MetaPhlAn4 taxonomic abundance tables *
|
Output
2 channels
#1
txt
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
${prefix}.txt
file
|
Combined MetaPhlAn4 table *.txt
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| metaphlan4 | Identify clades (phyla to species) present in the metagenome obtained from a microbiome sample and their relative abundance | https://huttenhower.sph.harvard.edu/metaphlan/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:55:20 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fmetaphlan%2Fmergemetaphlantables/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/metaphlan/mergemetaphlantables/blobs/sha256:5448034703616133d524599f8a279e55dd9b21f51ec1d6172941735ad22a6310 |
| Size | 2.6 KB |
| Checksum | sha256:5448034703616133d524599f8a279e55dd9b21f51ec1d6172941735ad22a6310 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:55:20 (UTC) | 1 | 2.6 KB | - |