nf-core/macsyfinder/download @ 0.0.0-0c7146d
Summary
Download MacSyFinder models using msf_data
Get started
Add the following snippet to your workflow script to include this module.
include { MACSYFINDER_DOWNLOAD } from 'nf-core/macsyfinder/download'
License
MIT License
Process
Name
|
MACSYFINDER_DOWNLOAD |
|---|
Input
1 channel
model_name
string
|
Name of the MacSyFinder model to download (e.g., 'TXSScan', 'CasFinder') |
|---|
Output
3 channels
#1
models
models
directory
|
Directory containing downloaded MacSyFinder model definitions models
|
|---|
#2
versions_macsydata
tuple
${task.process}
string
|
The name of the process |
|---|---|
msf_data
string
|
The name of the tool |
msf_data --version 2>&1 | sed "4!d;s/^- MacSyLib //;s/ *$//"
eval
|
The expression to obtain the version of the tool |
#3
versions_macsyfinder
tuple
${task.process}
string
|
The name of the process |
|---|---|
macsyfinder
string
|
The name of the tool |
macsyfinder --version 2>&1 | sed "1!d;s/^.*MacSyFinder //;s/ .*$//"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| macsyfinder | Detection of macromolecular systems in protein datasets using systems modelling and similarity search | https://github.com/gem-pasteur/macsyfinder |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:52:57 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fmacsyfinder%2Fdownload/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/macsyfinder/download/blobs/sha256:bad64a4347f9441a796c9a046f2ee3e184ec829ff9e32f32a91429d021be7450 |
| Size | 2.2 KB |
| Checksum | sha256:bad64a4347f9441a796c9a046f2ee3e184ec829ff9e32f32a91429d021be7450 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:52:57 (UTC) | 1 | 2.2 KB | - |