nf-core/last/lastdb @ 0.0.0-0c7146d
Summary
Prepare sequences for subsequent alignment with lastal.
Get started
Add the following snippet to your workflow script to include this module.
include { LAST_LASTDB } from 'nf-core/last/lastdb'
License
MIT License
Process
Name
|
LAST_LASTDB |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
fastx
file
|
Sequence file in FASTA or FASTQ format. May be compressed with gzip. *.{fasta,fasta.gz,fastq,fastq.gz}
|
Output
2 channels
#1
index
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
lastdb
directory
|
directory containing the files of the LAST index lastdb/
|
#2
versions_last
tuple
${task.process}
string
|
The name of the process |
|---|---|
last
string
|
The name of the tool |
lastal --version | sed 's/lastal //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| last | LAST finds & aligns related regions of sequences. | https://gitlab.com/mcfrith/last |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:51:48 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Flast%2Flastdb/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/last/lastdb/blobs/sha256:dfd37c13a4cee07eb866bb0b0f9f21ca18cd18d1bbc92f60a487ea0f2bf359f9 |
| Size | 2.9 KB |
| Checksum | sha256:dfd37c13a4cee07eb866bb0b0f9f21ca18cd18d1bbc92f60a487ea0f2bf359f9 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:51:48 (UTC) | 1 | 2.9 KB | - |