nf-core/krakenuniq/download @ 0.0.0-70ea099
Summary
Download KrakenUniq databases and related fles
Get started
Add the following snippet to your workflow script to include this module.
include { KRAKENUNIQ_DOWNLOAD } from 'nf-core/krakenuniq/download'
License
MIT License
Process
Name
|
KRAKENUNIQ_DOWNLOAD |
|---|
Input
1 channel
pattern
string
|
Pattern indicating what type of NCBI data to download. See KrakenUniq documnation for possibilities. |
|---|
Output
2 channels
#1
output
${pattern}/
directory
|
Directory containing downloaded data with directory naming being the user provided pattern. |
|---|
#2
versions_krakenuniq
tuple
${task.process}
string
|
The name of the process |
|---|---|
krakenuniq
string
|
The name of the tool |
krakenuniq --version | sed '1!d;s/KrakenUniq version //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| krakenuniq | Metagenomics classifier with unique k-mer counting for more specific results | https://github.com/fbreitwieser/krakenuniq |
| Version | 0.0.0-70ea099 |
|---|---|
| Commit ID | 70ea099f53b6bcff84c77e7d7a211ebc6ca8be32 |
| Release Date | 26 Apr 2026 19:30:25 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fkrakenuniq%2Fdownload/0.0.0-70ea099/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/krakenuniq/download/blobs/sha256:ec0b05d055ea701fb20dc1be51dd7697a3d060916b6e7659956fcbde75482e5e |
| Size | 2.2 KB |
| Checksum | sha256:ec0b05d055ea701fb20dc1be51dd7697a3d060916b6e7659956fcbde75482e5e |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-70ea099 | 26 Apr 2026 19:30:25 (UTC) | 1 | 2.2 KB | ↔ | |
| 0.0.0-0c7146d | 08 Apr 2026 18:51:31 (UTC) | 1 | 2.2 KB | - |