nf-core/gunc/downloaddb @ 0.0.0-0c7146d
Summary
Download database for GUNC detection of Chimerism and Contamination in Prokaryotic Genomes
Get started
Add the following snippet to your workflow script to include this module.
include { GUNC_DOWNLOADDB } from 'nf-core/gunc/downloaddb'
License
MIT License
Process
Name
|
GUNC_DOWNLOADDB |
|---|
Input
1 channel
db_name
string
|
Which database to download. Options: progenomes or gtdb progenomes|gtdb
|
|---|
Output
2 channels
#1
db
*.dmnd
file
|
GUNC database file *.dmnd
|
|---|
#2
versions_gunc
tuple
${task.process}
string
|
The name of the process |
|---|---|
gunc
string
|
The name of the tool |
gunc --version
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| gunc | Python package for detection of chimerism and contamination in prokaryotic genomes. | https://grp-bork.embl-community.io/gunc/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:46:21 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fgunc%2Fdownloaddb/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/gunc/downloaddb/blobs/sha256:237128529d49c8dfe594f9585b7a757bc4cac8db12e28062cd940886d0d6d41b |
| Size | 2.1 KB |
| Checksum | sha256:237128529d49c8dfe594f9585b7a757bc4cac8db12e28062cd940886d0d6d41b |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:46:21 (UTC) | 1 | 2.1 KB | - |