nf-core/grabix/check @ 0.0.0-0c7146d
Summary
Checks if the input file is bgzip compressed or not
Get started
Add the following snippet to your workflow script to include this module.
include { GRABIX_CHECK } from 'nf-core/grabix/check'
License
MIT License
Process
Name
|
GRABIX_CHECK |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
input
file
|
file to check compression *.gz
|
Output
2 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
compress_bgzip
meta
string
|
environmental variable with value "yes" or "no" |
|---|
| Tool | Description | Homepage |
|---|---|---|
| grabix | a wee tool for random access into BGZF files. | https://github.com/arq5x/grabix |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:45:13 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fgrabix%2Fcheck/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/grabix/check/blobs/sha256:64ab92d1964509fc2fa8f3caf6b0009d8f451cab9606b2e9888930c2d631229f |
| Size | 1.9 KB |
| Checksum | sha256:64ab92d1964509fc2fa8f3caf6b0009d8f451cab9606b2e9888930c2d631229f |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:45:13 (UTC) | 1 | 1.9 KB | - |