nf-core/falco @ 0.0.0-0c7146d
Summary
Run falco on sequenced reads
Get started
Add the following snippet to your workflow script to include this module.
include { FALCO } from 'nf-core/falco'
License
MIT License
Process
Name
|
FALCO |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
reads
file
|
List of input FastQ files of size 1 and 2 for single-end and paired-end data, respectively. |
Output
3 channels
#1
txt
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.txt
file
|
falco report data *_{data.txt}
|
#2
html
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.html
file
|
FastQC like report *_{fastqc_report.html}
|
#3
versions_falco
tuple
${task.process}
string
|
The name of the process |
|---|---|
falco
string
|
The name of the tool |
falco --version | sed '1!d;s/.* //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| fastqc | falco is a drop-in C++ implementation of FastQC to assess the quality of sequence reads. | https://falco.readthedocs.io/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:37:36 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Ffalco/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/falco/blobs/sha256:4e1e7d1efa4f476fb0acb71f547c5178475f13f291979e9f45c721acfc337078 |
| Size | 2.6 KB |
| Checksum | sha256:4e1e7d1efa4f476fb0acb71f547c5178475f13f291979e9f45c721acfc337078 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:37:36 (UTC) | 1 | 2.6 KB | - |