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nf-core/eido/convert @ 0.0.0-0c7146d

Convert any PEP project or Nextflow samplesheet to any format

Latest version: 0.0.0-0c7146d
Total downloads: 1
Source: nf-core/modules
Authors: @rafalstepien

Summary

Convert any PEP project or Nextflow samplesheet to any format

Get started

Add the following snippet to your workflow script to include this module.

include { EIDO_CONVERT } from 'nf-core/eido/convert'

License

MIT License

Process
Name EIDO_CONVERT
Input 2 channels
samplesheet file

Nextflow samplesheet or PEP project

*.{yaml,yml,csv}
format string

Extension of an output file

Output 2 channels
#1 versions_eido tuple
${task.process} string

The name of the process

eido string

The name of the tool

eido --version 2>&1 | sed 's/^.*eido //;s/ .*//' eval

The expression to obtain the version of the tool

#2 samplesheet_converted
${prefix}.${format} file

PEP project or samplesheet converted to csv file

Tool Description Homepage
eido Convert any PEP project or Nextflow samplesheet to any format http://eido.databio.org/en/latest/
Version 0.0.0-0c7146d
Commit ID 135d883a43b1a2324b4112cd270cf22e20835533
Release Date 08 Apr 2026 18:36:44 (UTC)
Download URL https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Feido%2Fconvert/0.0.0-0c7146d/download
OCI Store URL https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/eido/convert/blobs/sha256:7c878d875d7206c541d7411362b9ca66287cc5556fb3e44210302ca2eff084bc
Size 2.3 KB
Checksum sha256:7c878d875d7206c541d7411362b9ca66287cc5556fb3e44210302ca2eff084bc
Downloads 1
Version Date Status Downloads Size Diff
0.0.0-0c7146d 08 Apr 2026 18:36:44 (UTC) 1 2.3 KB -