nf-core/deeptools/plotheatmap @ 0.0.0-0c7146d
Summary
plots values produced by deeptools_computematrix as a heatmap
Get started
Add the following snippet to your workflow script to include this module.
include { DEEPTOOLS_PLOTHEATMAP } from 'nf-core/deeptools/plotheatmap'
License
MIT License
Process
Name
|
DEEPTOOLS_PLOTHEATMAP |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test' ] |
|---|---|
matrix
file
|
gzipped matrix file produced by deeptools_ computematrix deeptools utility *.{mat.gz}
|
Output
3 channels
#1
pdf
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.pdf
file
|
Output figure containing resulting plot *.{plotHeatmap.pdf}
|
#2
table
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.tab
file
|
Output table |
#3
versions_deeptools
tuple
${task.process}
string
|
The name of the process |
|---|---|
deeptools
string
|
The name of the tool |
plotHeatmap --version | sed "s/plotHeatmap //g"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| deeptools | A set of user-friendly tools for normalization and visualization of deep-sequencing data | n/a |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:35:37 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fdeeptools%2Fplotheatmap/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/deeptools/plotheatmap/blobs/sha256:42323544fc09226e86409dcabbd4c8902c14382d2ae8573b4bd5001cd77be172 |
| Size | 2.3 KB |
| Checksum | sha256:42323544fc09226e86409dcabbd4c8902c14382d2ae8573b4bd5001cd77be172 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:35:37 (UTC) | 1 | 2.3 KB | - |