nf-core/deacon/index @ 0.0.0-0c7146d
Summary
Create deacon index for reference genome
Get started
Add the following snippet to your workflow script to include this module.
include { DEACON_INDEX } from 'nf-core/deacon/index'
License
MIT License
Process
Name
|
DEACON_INDEX |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing reference information. e.g. [ id:'test', single_end:false ] |
|---|---|
fasta
file
|
Input genome fasta file *.{fasta,fasta.gz,fas,fas.gz,fa,fa.gz,fna,fna.gz}
|
Output
2 channels
#1
index
tuple
meta
map
|
Groovy Map containing reference information. e.g. [ id:'test', single_end:false ] |
|---|---|
*.idx
file
|
Deacon minimizer index file *.idx
|
#2
versions_deacon
tuple
${task.process}
string
|
The name of the process |
|---|---|
deacon
string
|
The name of the tool |
deacon --version | head -n1 | sed "s/deacon //g"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| deacon | Fast alignment-free sequence filter | https://github.com/bede/deacon |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:34:29 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fdeacon%2Findex/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/deacon/index/blobs/sha256:a06d2642a7145032ea5e8e974bd3090dd664847e0bc52990cf9d58a9845dfe5d |
| Size | 2.3 KB |
| Checksum | sha256:a06d2642a7145032ea5e8e974bd3090dd664847e0bc52990cf9d58a9845dfe5d |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:34:29 (UTC) | 1 | 2.3 KB | - |