nf-core/cooler/dump @ 0.0.0-0c7146d
Summary
Dump a cooler’s data to a text stream.
Get started
Add the following snippet to your workflow script to include this module.
include { COOLER_DUMP } from 'nf-core/cooler/dump'
License
MIT License
Process
Name
|
COOLER_DUMP |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
cool
file
|
Path to COOL file *.{cool,mcool}
|
resolution
integer
|
Resolution |
Output
2 channels
#1
bedpe
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.bedpe
file
|
Output text file *.bedpe
|
#2
versions_cooler
tuple
${task.process}
string
|
The name of the process |
|---|---|
cooler
string
|
The name of the tool |
cooler --version 2>&1 | sed "s/cooler, version //"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| cooler | Sparse binary format for genomic interaction matrices | https://open2c.github.io/cooler/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:32:46 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fcooler%2Fdump/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/cooler/dump/blobs/sha256:048e05b731567ee2e180f3dc4dbdf31fca87dbc8f0d4c919457d70789848b9e2 |
| Size | 2.2 KB |
| Checksum | sha256:048e05b731567ee2e180f3dc4dbdf31fca87dbc8f0d4c919457d70789848b9e2 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:32:46 (UTC) | 1 | 2.2 KB | - |