nf-core/bcftools/plotvcfstats @ 0.0.0-0c7146d
Summary
Plots the output of bcftools stats
Get started
Add the following snippet to your workflow script to include this module.
include { BCFTOOLS_PLOTVCFSTATS } from 'nf-core/bcftools/plotvcfstats'
License
MIT License
Process
Name
|
BCFTOOLS_PLOTVCFSTATS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'sample1' ] |
|---|---|
stats
file
|
Text file from BCFtools stats output *_stats.txt
|
Output
3 channels
#1
plot_dir
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'sample1' ] |
|---|---|
*plots*
directory
|
Output directory containing plots, raw data, and log files *plots*
|
#2
plot_pdf
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'sample1' ] |
|---|---|
*.pdf
file
|
(Link to the original) summary output in PDF *.pdf
|
#3
versions_bcftools
tuple
${task.process}
string
|
The name of the process |
|---|---|
bcftools
string
|
The name of the tool |
bcftools --version | sed '1!d; s/^.*bcftools //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| plot | Script for processing output of bcftools stats, plots graphs and creates a PDF presentation. | http://samtools.github.io/bcftools/bcftools.html |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:25:20 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fbcftools%2Fplotvcfstats/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/bcftools/plotvcfstats/blobs/sha256:555d1882f796b4b08d26cbf0530c38e5c9c1a328c5c7d6589c704d6869497418 |
| Size | 3.0 KB |
| Checksum | sha256:555d1882f796b4b08d26cbf0530c38e5c9c1a328c5c7d6589c704d6869497418 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:25:20 (UTC) | 1 | 3.0 KB | - |