nf-core/bandage/image @ 0.0.0-0c7146d
Summary
Render an assembly graph in GFA 1.0 format to PNG and SVG image formats
Get started
Add the following snippet to your workflow script to include this module.
include { BANDAGE_IMAGE } from 'nf-core/bandage/image'
License
MIT License
Process
Name
|
BANDAGE_IMAGE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
gfa
file
|
Assembly graph in GFA 1.0 format *.gfa
|
Output
3 channels
#1
png
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.png
file
|
Bandage image in PNG format *.png
|
#2
svg
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.svg
file
|
Bandage image in SVG format *.svg
|
#3
versions_bandage
tuple
${task.process}
string
|
The name of the process |
|---|---|
bandage
string
|
The name of the tool |
export QT_QPA_PLATFORM=offscreen; Bandage --version 2>&1| grep Version | sed "s/^Version: //"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| bandage | Bandage - a Bioinformatics Application for Navigating De novo Assembly Graphs Easily | https://github.com/rrwick/Bandage |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:24:28 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fbandage%2Fimage/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/bandage/image/blobs/sha256:1862db1447f7c39a1030f96f5d16f393369c636fd9d0ace9fcaea121571d9df8 |
| Size | 2.7 KB |
| Checksum | sha256:1862db1447f7c39a1030f96f5d16f393369c636fd9d0ace9fcaea121571d9df8 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:24:28 (UTC) | 1 | 2.7 KB | - |