nf-core/amrfinderplus/update @ 0.0.0-0c7146d
Summary
Identify antimicrobial resistance in gene or protein sequences
Get started
Add the following snippet to your workflow script to include this module.
include { AMRFINDERPLUS_UPDATE } from 'nf-core/amrfinderplus/update'
License
MIT License
Process
Name
|
AMRFINDERPLUS_UPDATE |
|---|
Output
2 channels
#1
db
amrfinderdb.tar.gz
file
|
The latest AMRFinder+ database in a compressed tarball *.tar.gz
|
|---|
#2
versions_amrfinder
tuple
${task.process}
string
|
The name of the process |
|---|---|
amrfinder
string
|
The name of the tool |
amrfinder --version
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| amrfinderplus | AMRFinderPlus finds antimicrobial resistance and other genes in protein or nucleotide sequences. | https://github.com/ncbi/amr/wiki |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:21:57 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Famrfinderplus%2Fupdate/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/amrfinderplus/update/blobs/sha256:7711d0381bc76399bdbbb89dc22c890ac93f51302eff7ce433e070e41c9d1a54 |
| Size | 2.0 KB |
| Checksum | sha256:7711d0381bc76399bdbbb89dc22c890ac93f51302eff7ce433e070e41c9d1a54 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:21:57 (UTC) | 1 | 2.0 KB | - |